Tools
We develop and utilise our own tools for our various research interests. Listed below are among those featured in our publications.
Control based ChIPSeq Analysis Tools (CCAT) A software package for the analysis of ChIP-seq data with negative control. |
|
ChIPDiff provides a solution for the identification of Differential Histone Modification Sites (DHMSs) by comparing two ChIP-seq libraries (L1 and L2). An HMM is employed in ChIPDiff to infer the states of histone modification changes.
|
|
|
A tool to find peaks from ChIPSeq data generated from the Solexa / Illumina platform. Optionally, data from the peaks found can also be exported to simple textfile format for further usage. |
|
|
|
|