ChIPDiff Featured Publication
Xu H., Wei C.L., Lin F., Sung W.K. (2008)
"Genome-wide Identification of Differential Histone Modification Sites from ChIP-Seq Data". Bioinformatics, 24:2344-2349.
|Tools & source codes|
|The DHMS regions identified by ChIPDiff. Regions were seperated into 6 sheets: ESC enriched K27, ESC enriched K4, ESC enriched K36, NPC enriched K27, NPC enriched K4, and NPC enriched K36.|
|Supplementary Table 2||Annotation of 223 HCNE genes with ESC enriched K27 DHMSs and gene expression.|
|Supplementary Table 3||Annotation of K4/K36 DHMSs for 18795 RefSeq genes. Expression data retrieved from in Mikkelson et.al. (2007)|
|Supplementary Table 4||Assignment of lanes in Mikkelson et al.'s ChIP-seq data to the replicates defined in the paper|